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Get neuron projections correlations

Syntax

function [out,W]=get_neuron_projections_correlations(P,k) 

Description

Compute correlation metrics for neuron projections.

Inputs:

Parameter Name Type Description
P Table Table containing neuron projection data.
k Optional Index of the projection to evaluate. k = 1 Mean projections, k = 2 Blood vessels, k = 3 Neuron, k = 4 PNR image

Outputs:

Parameter Name Type Description
out Double Minimum correlation deviation across projections.
W Double Weighting factor based on projection correlation.

Example usage:

[out, W] = get_neuron_projections_correlations(P);
[out, W] = get_neuron_projections_correlations(P, 2);

Notes: - Uses normalized cross-correlation to compare neuron projections across sessions. - Computes mean and standard deviation of correlation within a limited region. - Flags sessions with low correlation for further inspection.